Publications 2022

 

Adams, S., & Carré, I. A. (2021). Chromatin Immunoprecipitation Protocol for Circadian Clock Proteins. In D. Staiger, S. Davis, & A. M. Davis (Eds.), Plant Circadian Networks (Vol. 2398, pp. 135–150). Springer US. https://doi.org/10.1007/978-1-0716-1912-4_12

Aggarwal, S., Raj, A., Kumar, D., Dash, D., & Yadav, A. K. (2022). False discovery rate: The Achilles’ heel of proteogenomics. Briefings in Bioinformatics, bbac163. https://doi.org/10.1093/bib/bbac163

Alawadi, A. A., Benedito, V. A., Skinner, R. C., Warren, D. C., Showman, C., & Tou, J. C. (2022). RNA-sequencing revealed apple pomace ameliorates expression of genes in the hypothalamus associated with neurodegeneration in female rats fed a Western diet during adolescence to adulthood. Nutritional Neuroscience, 1–13. https://doi.org/10.1080/1028415X.2022.2050008

Amos, B., Aurrecoechea, C., Barba, M., Barreto, A., Basenko, E. Y., Bażant, W., Belnap, R., Blevins, A. S., Böhme, U., Brestelli, J., Brunk, B. P., Caddick, M., Callan, D., Campbell, L., Christensen, M. B., Christophides, G. K., Crouch, K., Davis, K., DeBarry, J., … Zheng, J. (2022). VEuPathDB: The eukaryotic pathogen, vector and host bioinformatics resource center. Nucleic Acids Research50(D1), D898–D911. https://doi.org/10.1093/nar/gkab929

Amundson, K. K., Borton, M. A., Daly, R. A., Hoyt, D. W., Wong, A., Eder, E., Moore, J., Wunch, K., Wrighton, K. C., & Wilkins, M. J. (2022). Microbial colonization and persistence in deep fractured shales is guided by metabolic exchanges and viral predation. Microbiome10(1), 5. https://doi.org/10.1186/s40168-021-01194-8

Andrade-Martínez, J. S., Camelo Valera, L. C., Chica Cárdenas, L. A., Forero-Junco, L., López-Leal, G., Moreno-Gallego, J. L., Rangel-Pineros, G., & Reyes, A. (2022). Computational Tools for the Analysis of Uncultivated Phage Genomes. Microbiology and Molecular Biology Reviews86(2), e00004-21. https://doi.org/10.1128/mmbr.00004-21

Arras, P., Frank, P., Haim, P., Knollmüller, J., Leike, R., Reinecke, M., & Enßlin, T. (2022). Variable structures in M87* from space, time and frequency resolved interferometry. Nature Astronomy6(2), 259–269. https://doi.org/10.1038/s41550-021-01548-0

Balk, M. A., Deck, J., Emery, K. F., Walls, R. L., Reuter, D., LaFrance, R., Arroyo-Cabrales, J., Barrett, P., Blois, J., Boileau, A., Brenskelle, L., Cannarozzi, N. R., Cruz, J. A., Dávalos, L. M., de la Sancha, N. U., Gyawali, P., Hantak, M. M., Hopkins, S., Kohli, B., … Guralnick, R. P. (2022). A solution to the challenges of interdisciplinary aggregation and use of specimen-level trait data. IScience, 105101. https://doi.org/10.1016/j.isci.2022.105101

Balushi, M. A., Kumar, R., Al-Rashdi, A., Ratna, A., Al-Jabri, A., Al-shekaili, N., Rani, R., Sumri, S. A., Al-Ghabshi, L., Al-Abri, S., & Al-Jardani, A. (2022). Genomic analysis of the emerging carbapenem-resistant Klebsiella pneumoniae sequence type 11 harbouring Klebsiella pneumoniae carbapenemase (KPC) in Oman. Journal of Infection and Public Health15(10), 1089–1096. https://doi.org/10.1016/j.jiph.2022.08.014

Barakhshan, P., & Eigenmann, R. (2022). Exchanging Best Practices for Supporting Computational and Data-Intensive Research, The Xpert Network. Practice and Experience in Advanced Research Computing, 1–7. https://doi.org/10.1145/3491418.3530293

Beck, M. A., Liu, C.-Y., Bidinosti, C. P., Henry, C. J., Godee, C. M., & Ajmani, M. (2021). An extensive lab-and field-image dataset of crops and weeds for computer vision tasks in agriculture.

Bendaoud, F., Kim, G., Larose, H., Westwood, J. H., Zermane, N., & Haak, D. C. (2022). Genotyping‐by‐sequencing analysis of Orobanche crenata populations in Algeria reveals genetic differentiation. Ecology and Evolution12(3). https://doi.org/10.1002/ece3.8750

Bhinda, M. S., Sanadya, S. K., Kumari, A., Kant, L., & Debnath, A. (2022). Omics for Abiotic Stress Tolerance in Foxtail Millet. In R. N. Pudake, A. U. Solanke, A. M. Sevanthi, & P. Rajendrakumar (Eds.), Omics of Climate Resilient Small Millets (pp. 27–52). Springer Nature Singapore. https://doi.org/10.1007/978-981-19-3907-5_2

Blake Steiner. (2022). Delayed Tree Dormancy Resulted in Higher Annual Savanna Gross Primary Productivity in the Northern Sonoran Desert [The University of Arizona]. https://www.proquest.com/openview/fdf40aa85eba055900d00ecc904606d5/1?pq-origsite=gscholar&cbl=18750&diss=y

Boeckman, J., Korn, A., Yao, G., Ravindran, A., Gonzalez, C., & Gill, J. (2022). Sheep in wolves’ clothing: Temperate T7-like bacteriophages and the origins of the Autographiviridae. Virology568, 86–100. https://doi.org/10.1016/j.virol.2022.01.013

Buchholz, H. H., Bolaños, L. M., Bell, A. G., Michelsen, M. L., Allen, M. J., & Temperton, B. (2022). A Novel and Ubiquitous Marine Methylophage Provides Insights into Viral-Host Coevolution and Possible Host-Range Expansion in Streamlined Marine Heterotrophic Bacteria. Applied and Environmental Microbiology88(7), e00255-22. https://doi.org/10.1128/aem.00255-22

Bunting, M., Bhadani, R., Nice, M., Elmadani, S., & Sprinkle, J. (2022). Data from the Development Evolution of a Vehicle for Custom Control. 2022 2nd Workshop on Data-Driven and Intelligent Cyber-Physical Systems for Smart Cities Workshop (DI-CPS), 40–46. https://doi.org/10.1109/DI-CPS56137.2022.00013

Busta, L., Dweikat, I., Sato, S. J., Qu, H., Xue, Y., Zhou, B., Gan, L., Yu, B., Clemente, T. E., Cahoon, E. B., & Zhang, C. (2022). Chemical and genetic variation in feral Cannabis sativa populations across the Nebraska climate gradient. Phytochemistry200, 113206. https://doi.org/10.1016/j.phytochem.2022.113206

Cardone, R., Stubbs, J., Black, S., Garcia, C., Jamthe, A., Packard, M., & Padhy, S. (2022). A Design Pattern for Recoverable Job Management. Practice and Experience in Advanced Research Computing, 1–4. https://doi.org/10.1145/3491418.3535136

Chakrabarti, M., Nagabhyru, P., Schardl, C. L., & Dinkins, R. D. (2022). Differential gene expression in tall fescue tissues in response to water deficit. The Plant Genome15(2). https://doi.org/10.1002/tpg2.20199

Chávez Montes, R. A., Haber, A., Pardo, J., Powell, R. F., Divisetty, U. K., Silva, A. T., Hernández-Hernández, T., Silveira, V., Tang, H., Lyons, E., Herrera Estrella, L. R., VanBuren, R., & Oliver, M. J. (2022). A comparative genomics examination of desiccation tolerance and sensitivity in two sister grass species. Proceedings of the National Academy of Sciences119(5), e2118886119. https://doi.org/10.1073/pnas.2118886119

Chiozzi, G., De Marchi, G., Fasola, M., Ibrahim, K. M., Bardelli, G., Hagos, F., Rocca, F., & Masseti, M. (2022). Insular gazelles of the circum-Arabian seas: Origin, distribution, dwarfism and taxonomy. Mammalian Biology102(1), 1–20. https://doi.org/10.1007/s42991-021-00186-3

Christine Natalie Palermo. (2022). Diversity, Relative Abundance, and Functional Potential of Viral and Bacterial Communities [University of Toronto (Canada)]

Corwin, L. A., Ramsey, M. E., Vance, E. A., Woolner, E., Maiden, S., Gustafson, N., & Harsh, J. A. (2022). Students’ Emotions, Perceived Coping, and Outcomes in Response to Research-Based Challenges and Failures in Two Sequential CUREs. CBE—Life Sciences Education21(2), ar23. https://doi.org/10.1187/cbe.21-05-0131

Darianne M. Alvarez-Franceschi. (2022). Macro and Microorganisms’ Behavior Based on the Janzen-Connell Hypothesis after a Hurricane in El Yunque National Rainforest [Ana G. Mendez University]. https://www.proquest.com/docview/2677675985?pq-origsite=gscholar&fromopenview=true

Dirk Joldersma,  Norah Sadowski,  Winston Timp &  Zhongchi Liu, ,. (2022). Assembly and annotation of Fragaria vesca “Yellow Wonder” genome, a model diploid strawberry for molecular genetic research. Fruit Research2(13). https://doi.org/10.48130/FruRes-2022-0013

Dominguez-Huerta, G., Zayed, A. A., Wainaina, J. M., Guo, J., Tian, F., Pratama, A. A., Bolduc, B., Mohssen, M., Zablocki, O., Pelletier, E., Delage, E., Alberti, A., Aury, J.-M., Carradec, Q., da Silva, C., Labadie, K., Poulain, J., Tara Oceans Coordinators§, Bowler, C., … Sullivan, M. B. (2022). Diversity and ecological footprint of Global Ocean RNA viruses. Science376(6598), 1202–1208. https://doi.org/10.1126/science.abn6358

Drummond, C. P., Cochrane, T. S., & Sytsma, K. J. (2022). Western North American Plants Disjunct in the Great Lakes Region: 40 Years after Marquis and Voss. International Journal of Plant Sciences, 000–000. https://doi.org/10.1086/721653

Dykes, J., Kappenman, K., & Nissen, E. D. (2022). Using DNA Barcoding Methods to Identify Wild Huckleberry, Vaccinium membranaceum , as a Classroom Project. The American Biology Teacher84(1), 40–44. https://doi.org/10.1525/abt.2022.84.1.40

Ehsani, M. R., Zarei, A., Gupta, H. V., Barnard, K., Lyons, E., & Behrangi, A. (2022). NowCasting-Nets: Representation Learning to Mitigate Latency Gap of Satellite Precipitation Products Using Convolutional and Recurrent Neural Networks. IEEE Transactions on Geoscience and Remote Sensing60, 1–21. https://doi.org/10.1109/TGRS.2022.3158888

Fernandez-Pozo, N., Haas, F. B., Gould, S. B., & Rensing, S. A. (2022). An overview of bioinformatics, genomics and transcriptomics resources for bryophytes. Journal of Experimental Botany, erac052. https://doi.org/10.1093/jxb/erac052

Fitzgerald, C., Vens, C. S., Miller, N., Barker, R., Westphall, M., Lombardino, J., Miao, J., Swanson, S. J., & Gilroy, S. (2022). Using the Automated Botanical Contact Device (ABCD) to Deliver Reproducible, Intermittent Touch Stimulation to Plants. In E. B. Blancaflor (Ed.), Plant Gravitropism (Vol. 2368, pp. 81–94). Springer US. https://doi.org/10.1007/978-1-0716-1677-2_6

Fox, A. M., Huo, X., Hoar, T. J., Dashti, H., Smith, W. K., MacBean, N., Anderson, J. L., Roby, M., & Moore, D. J. P. (2022). Assimilation of Global Satellite Leaf Area Estimates Reduces Modeled Global Carbon Uptake and Energy Loss by Terrestrial Ecosystems. Journal of Geophysical Research: Biogeosciences127(8). https://doi.org/10.1029/2022JG006830

Gage, J. L., Mali, S., McLoughlin, F., Khaipho-Burch, M., Monier, B., Bailey-Serres, J., Vierstra, R. D., & Buckler, E. S. (2022). Variation in upstream open reading frames contributes to allelic diversity in maize protein abundance. Proceedings of the National Academy of Sciences119(14), e2112516119. https://doi.org/10.1073/pnas.2112516119

Guo, W.-Y., Serra-Diaz, J. M., Schrodt, F., Eiserhardt, W. L., Maitner, B. S., Merow, C., Violle, C., Anand, M., Belluau, M., Bruun, H. H., Byun, C., Catford, J. A., Cerabolini, B. E. L., Chacón-Madrigal, E., Ciccarelli, D., Cornelissen, J. H. C., Dang-Le, A. T., de Frutos, A., Dias, A. S., … Svenning, J.-C. (2022). High exposure of global tree diversity to human pressure. Proceedings of the National Academy of Sciences119(25), e2026733119. https://doi.org/10.1073/pnas.2026733119

Gupta, S., & Rather, S. A. (2022). Innovations in Crop Production: An Amalgamation of Abiotic Stress Physiology and Technology. Plant Abiotic Stress Physiology: Volume 1: Responses and Adaptations, 1.

Hackett, J., Gibson, H., Frelinger, J., & Buntzman, A. (2022). Using the Collaborative Cross and Diversity Outbred Mice in Immunology. Current Protocols2(9). https://doi.org/10.1002/cpz1.547

Harris, N. L., Hokamp, K., Ménager, H., Munoz-Torres, M., Unni, D., Vasilevsky, N., & Williams, J. (2022). BOSC 2022: The first hybrid and 23rd annual Bioinformatics Open Source Conference. F1000Research11, 1034. https://doi.org/10.12688/f1000research.125043.1

Harrison, K., Levy, J. G., & Tamborindeguy, C. (2022). Effects of ‘Candidatus Liberibacter solanacearum’ haplotypes A and B on tomato gene expression and geotropism. BMC Plant Biology22(1), 156. https://doi.org/10.1186/s12870-022-03505-z

Heilman, K. A., Dietze, M. C., Arizpe, A. A., Aragon, J., Gray, A., Shaw, J. D., Finley, A. O., Klesse, S., DeRose, R. J., & Evans, M. E. K. (2022). Ecological forecasting of tree growth: Regional fusion of tree‐ring and forest inventory data to quantify drivers and characterize uncertainty. Global Change Biology, gcb.16038. https://doi.org/10.1111/gcb.16038

Hofstatter, P. G., Thangavel, G., Lux, T., Neumann, P., Vondrak, T., Novak, P., Zhang, M., Costa, L., Castellani, M., Scott, A., Toegelová, H., Fuchs, J., Mata-Sucre, Y., Dias, Y., Vanzela, A. L. L., Huettel, B., Almeida, C. C. S., Šimková, H., Souza, G., … Marques, A. (2022). Repeat-based holocentromeres influence genome architecture and karyotype evolution. Cell185(17), 3153-3168.e18. https://doi.org/10.1016/j.cell.2022.06.045

Hongfei Chen1*, Zheng Xiao1,2*, Baoqing Ding1,3, Pamela K. Diggle1, Yao-Wu Yuan. (2022). Modular regulation of floral traits by a PRE1 homolog in Mimulus verbenaceus: Implications for the role of pleiotropy in floral integration.

Hossain, C., Hernandez, V., McHugh, L., Tran, P.-T., & Nash, B. (2022). Analyzing the impacts of tobacco mosaic virus on the microbial diversity of Nicotiana benthamiana. Journal of Plant Pathology104(3), 959–967. https://doi.org/10.1007/s42161-022-01103-4

Jhu, M.-Y., Farhi, M., Wang, L., Philbrook, R. N., Belcher, M. S., Nakayama, H., Zumstein, K. S., Rowland, S. D., Ron, M., Shih, P. M., & Sinha, N. R. (2022). Heinz-resistant tomato cultivars exhibit a lignin-based resistance to field dodder ( Cuscuta campestris ) parasitism. Plant Physiology, kiac024. https://doi.org/10.1093/plphys/kiac024

Jiang, J.-Z., Yuan, W.-G., Shang, J., Shi, Y.-H., Yang, L.-L., Liu, M., Zhu, P., Jin, T., Sun, Y., & Yuan, L.-H. (2022). Virus classification for viral genomic fragments using PhaGCN2 [Preprint]. In Review. https://doi.org/10.21203/rs.3.rs-1658089/v1

Joaquim, P. I. L., Molinari, M. D. C., Marin, S. R. R., Barbosa, D. A., Viana, A. J. C., Rech, E. L., Henning, F. A., Nepomuceno, A. L., & Mertz-Henning, L. M. (2022). Nitrogen compounds transporters: Candidates to increase the protein content in soybean seeds. Journal of Plant Interactions17(1), 309–318. https://doi.org/10.1080/17429145.2022.2039791

Kavas, M., Mostafa, K., Seçgin, Z., Yerlikaya, B. A., Yıldırım, K., & Gökdemir, G. (2022). Genome-wide analysis of DUF221 domain-containing gene family in common bean and identification of its role on abiotic and phytohormone stress response. Genetic Resources and Crop Evolutionhttps://doi.org/10.1007/s10722-022-01421-7

Keuler, R., Jensen, J., Barcena-Peña, A., Grewe, F., Thorsten Lumbsch, H., Huang, J.-P., & Leavitt, S. D. (2022). Interpreting phylogenetic conflict: Hybridization in the most speciose genus of lichen-forming fungi. Molecular Phylogenetics and Evolution174, 107543. https://doi.org/10.1016/j.ympev.2022.107543

Kim, K. E., Jung, S. W., Park, J. S., Kim, H.-J., Lee, C., Ha, S.-Y., & Lee, T.-K. (2022). Optimized Metavirome Analysis of Marine DNA Virus Communities for Taxonomic Profiling. Ocean Science Journal57(2), 259–268. https://doi.org/10.1007/s12601-022-00064-0

Koontz, M. J., Scholl, V. M., Spiers, A. I., Cattau, M. E., Adler, J., McGlinchy, J., Goulden, T., Melbourne, B. A., & Balch, J. K. (2022). Democratizing macroecology: Integrating unoccupied aerial systems with the National Ecological Observatory Network. Ecosphere13(8). https://doi.org/10.1002/ecs2.4206

Labbé, M., Thaler, M., Pitot, T. M., Rapp, J. Z., Vincent, W. F., & Culley, A. I. (2022). Climate-Endangered Arctic Epishelf Lake Harbors Viral Assemblages with Distinct Genetic Repertoires. Applied and Environmental Microbiology88(17), e00228-22. https://doi.org/10.1128/aem.00228-22

Lamanchai, K., Salmon, D. L., Smirnoff, N., Sutthinon, P., Roytrakul, S., Leetanasaksakul, K., Kittisenachai, S., & Jantasuriyarat, C. (2022). OsVTC1-1 RNAi Mutant with Reduction of Ascorbic Acid Synthesis Alters Cell Wall Sugar Composition and Cell Wall-Associated Proteins. Agronomy12(6), 1272. https://doi.org/10.3390/agronomy12061272

Li, F., Huang, S., Mei, Y., Wu, B., Hou, Z., Zhan, P., Hou, Z., Huang, W., Zhao, J., & Wang, J. (2022). Genome assembly provided new insights into the Cinnamomum burmannii evolution and D-borneol biosynthesis differences between chemotypes. Industrial Crops and Products186, 115181. https://doi.org/10.1016/j.indcrop.2022.115181

Liu, G., Sun, Y., Jia, L., Li, R., & Zuo, Y. (2022). Chromatin accessibility shapes meiotic recombination in mouse primordial germ cells through assisting double-strand breaks and loop formation. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms1865(5), 194844. https://doi.org/10.1016/j.bbagrm.2022.194844

Lu, L., Guo, F., Zhang, Z., Zhu, X., Hao, Y., Yu, J., Ye, W., & Zhang, Z. (2022). Genome sequencing reveals the evolution and pathogenic mechanisms of the wheat sharp eyespot pathogen Rhizoctonia cerealis. The Crop Journal, S2214514122002094. https://doi.org/10.1016/j.cj.2022.07.024

Martínez-Alvarez, L., Ramond, J.-B., Vikram, S., León-Sobrino, C., Maggs-Kölling, G., & Cowan, D. (2022). With a pinch of salt: Metagenomic insights into Namib Desert salt pan microbial mats and halites reveal functionally adapted and competitive communities [Preprint]. Microbiology. https://doi.org/10.1101/2022.02.18.481119

Martinson, J. W., Bencic, D. C., Toth, G. P., Kostich, M. S., Flick, R. W., See, M. J., Lattier, D., Biales, A. D., & Huang, W. (2022). De Novo Assembly of the Nearly Complete Fathead Minnow Reference Genome Reveals a Repetitive but Compact Genome. Environmental Toxicology and Chemistry41(2), 448–461. https://doi.org/10.1002/etc.5266

Marx, V. (2022). Why the ocean virome matters. Nature Methods19(8), 924–927. https://doi.org/10.1038/s41592-022-01567-3

Miyoshi, M., Kato, Y., & Makino, J. (2022). The jet and resolved features of the central supermassive black hole of M 87 observed with EHT. The Astrophysical Journal933(1), 36. https://doi.org/10.3847/1538-4357/ac6ddb

Morey, J. S., Balmer, B. C., Zolman, E. S., Takeshita, R., De Guise, S., Rowles, T. K., Smith, C. R., Wells, R. S., & Schwacke, L. H. (2022). Transcriptome profiling of blood from common bottlenose dolphins (Tursiops truncatus) in the northern Gulf of Mexico to enhance health assessment capabilities. PLOS ONE17(8), e0272345. https://doi.org/10.1371/journal.pone.0272345

Morisse, M., Wells, D. M., Millet, E. J., Lillemo, M., Fahrner, S., Cellini, F., Lootens, P., Muller, O., Herrera, J. M., Bentley, A. R., & Janni, M. (2022). A European perspective on opportunities and demands for field-based crop phenotyping. Field Crops Research276, 108371. https://doi.org/10.1016/j.fcr.2021.108371

Naithani, K., Jones, M., & Grayson, K. L. (2022). Building communities of teaching practice and data‐driven open education resources with NEON faculty mentoring networks. Ecosphere13(8). https://doi.org/10.1002/ecs2.4210

Nandety, R. S., Wen, J., & Mysore, K. S. (2022). Medicago truncatula resources to study legume biology and symbiotic nitrogen fixation. Fundamental Research, S2667325822002904. https://doi.org/10.1016/j.fmre.2022.06.018

Nazranov, H., Orzalieva, M., Shalov, T., Tamakhina, A., & Knyazev, B. (2022). The effectiveness of the use of mineral fertilizers in the technology of potato seed production in the conditions of the mountainous zone of Kabardino-Balkaria. BIO Web of Conferences51, 04014. https://doi.org/10.1051/bioconf/20225104014

Nelson, A. R., Narrowe, A. B., Rhoades, C. C., Fegel, T. S., Daly, R. A., Roth, H. K., Chu, R. K., Amundson, K. K., Young, R. B., Steindorff, A. S., Mondo, S. J., Grigoriev, I. V., Salamov, A., Borch, T., & Wilkins, M. J. (2022). Wildfire-dependent changes in soil microbiome diversity and function. Nature Microbiology7(9), 1419–1430. https://doi.org/10.1038/s41564-022-01203-y

Nelson Dittrich, A. C., & Nelson, A. D. L. (2022). High-Throughput Evolutionary Comparative Analysis of Long Intergenic Noncoding RNAs in Multiple Organisms. In A. Pereira-Santana, S. D. Gamboa-Tuz, & L. C. Rodríguez-Zapata (Eds.), Plant Comparative Genomics (Vol. 2512, pp. 45–60). Springer US. https://doi.org/10.1007/978-1-0716-2429-6_3

Nguyen, D. T., Hayes, J. E., Atieno, J., Li, Y., Baumann, U., Pattison, A., Bramley, H., Hobson, K., Roorkiwal, M., Varshney, R. K., Colmer, T. D., & Sutton, T. (2022). The genetics of vigour-related traits in chickpea (Cicer arietinum L.): Insights from genomic data. Theoretical and Applied Genetics135(1), 107–124. https://doi.org/10.1007/s00122-021-03954-4

Nguyen, N. T., Khan, M. A., Castro–Guerrero, N. A., Chia, J.-C., Vatamaniuk, O. K., Mari, S., Jurisson, S. S., & Mendoza-Cozatl, D. G. (2022). Iron Availability within the Leaf Vasculature Determines the Magnitude of Iron Deficiency Responses in Source and Sink Tissues in ArabidopsisPlant and Cell Physiology63(6), 829–841. https://doi.org/10.1093/pcp/pcac046

Nicola Kuhn. (2022). Vegetation response to climate change: A functional traits-based approach [University of Oxford, St Edmund Hall College].

Oruche, R., Milman, E., Lemus Alarcon, M., Cheng, X., Pandey, A., Wang, S., Calyam, P., & Kee, K. (2022). Science gateway adoption using plug‐in middleware for evidence‐based healthcare data management. Concurrency and Computation: Practice and Experiencehttps://doi.org/10.1002/cpe.7195

Palacio, S., Cera, A., Escudero, A., Luzuriaga, A. L., Sánchez, A. M., Mota, J. F., Pérez‐Serrano Serrano, M., Merlo, M. E., Martínez‐Hernández, F., Salmerón‐Sánchez, E., Mendoza‐Fernández, A. J., Pérez‐García, F. J., Montserrat‐Martí, G., & Tejero, P. (2022). Recent and ancient evolutionary events shaped plant elemental composition of edaphic endemics: A phylogeny‐wide analysis of Iberian gypsum plants. New Phytologist235(6), 2406–2423. https://doi.org/10.1111/nph.18309

Palos, K. (2022). Identifying Long Noncoding RNAs and Examining Their Functional Roles in Brassicaceae [PhD Thesis]. In ProQuest Dissertations and Theseshttps://ezproxy.library.arizona.edu/login?url=https://www.proquest.com/dissertations-theses/identifying-long-noncoding-rnas-examining-their/docview/2626931596/se-2?accountid=8360

Palos, K., Nelson Dittrich, A. C., Yu, L., Brock, J. R., Railey, C. E., Wu, H.-Y. L., Sokolowska, E., Skirycz, A., Hsu, P. Y., Gregory, B. D., Lyons, E., Beilstein, M. A., & Nelson, A. D. L. (2022). Identification and functional annotation of long intergenic non-coding RNAs in Brassicaceae. The Plant Cell34(9), 3233–3260. https://doi.org/10.1093/plcell/koac166

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Zhang, X., Zhu, Y., Kremling, K. A. G., Romay, M. C., Bukowski, R., Sun, Q., Gao, S., Buckler, E. S., & Lu, F. (2022). Genome-wide analysis of deletions in maize population reveals abundant genetic diversity and functional impact. Theoretical and Applied Genetics135(1), 273–290. https://doi.org/10.1007/s00122-021-03965-1

Zhang, Y., Clancy, J., Jensen, J., McMullin, R. T., Wang, L., & Leavitt, S. D. (2022). Providing Scale to a Known Taxonomic Unknown—At Least a 70-Fold Increase in Species Diversity in a Cosmopolitan Nominal Taxon of Lichen-Forming Fungi. Journal of Fungi8(5), 490. https://doi.org/10.3390/jof8050490

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